Because the fold alter versus saline-treated animals. Enrichment is calculated as the IP versus input ratio and shows the abundance of your transcript within the targeted cell sort (IP) when in comparison with equal amounts of RNA from the whole testis (input). Sequences from the various primer sets utilized were obtained from Primerbank (http://pga.mgh. harvard.edu/primerbank/) [24] and may be located in Table S6.Immunoprecipitation AssaysAfter treatments, testes had been homogenized and immunoprecipitation was performed as described previously [20] with minor modifications. Briefly, ten ul of anti-HA antibody (Covance) have been coupled to 200 ul of beads in citrate-phosphate buffer pH 5.0 and also the antibody-bead complex was added to the cleared homogenates and incubated overnight at 4uC. Soon after incubation, beads have been washed in higher salt buffer 3 times for 5 min, resuspended in RLT buffer (with beta-mercaptoethanol; Qiagen) and stored at 280uC till RNA extraction.LH, FSH and Testosterone Serum DeterminationAfter treatments, blood was obtained by cardiac puncture and allowed to clot in Microtainer serum separator tubes (BectonDickinson) for 1 h at RT. Serum was recovered by centrifugation and stored at 280uC for later analysis. LH and FSH serum levels had been determined by RIA at the University of Virginia Center for Study in Reproduction Ligand Assay and Evaluation Core, and testosterone levels have been determined utilizing the Testosterone EIA kit (Cayman Chemical).MA-10 Cell CultureCells had been cultured as described in [25]. 16105 cells/ml have been seeded onto gelatin-coated 6-well plates and allowed to attach for two days. For LH treatment, cells have been incubated in serum-free medium containing 1 BSA overnight before the addition of purified human LH (0.two Units/ml). Cells were lysed in SDS sample buffer (62.5 mM Tris, pH 6.8, 2 SDS, ten glycerol) for protein analysis, in RLT buffer (Qiagen) for RNA extraction, or as described in [26] for polysome analysis. Sucrose density gradient fractionation and polysome evaluation was performed as described in [20].RNA ExtractionRNA in the inputs (50 ul) along with the pellets was obtained using the RNeasy mini kit (Qiagen) based on manufacturer’s directions. Total RNA was quantified employing a NanoDrop 1000 spectrophotometer (Thermo Scientific) and its good quality was assessed working with an Agilent 2100 Bioanalyzer with the RNA 6000 Nano kit (Agilent RIP2 kinase inhibitor 2 chemical information Technologies).Western Blot AnalysisProtein lysates were quantified employing the BCA protein assay (Pierce). Immediately after protein determination, 20 ug of protein were separated by SDS-PAGE and transferred onto nitrocellulosePLOS 1 | www.plosone.orgRegulation of Sertoli and Leydig Cell Transcriptsmembranes. Immediately after transfer, membranes have been blocked with five milk in TBST (Tris-buffered saline containing 0.1 Tween-20) and incubated overnight using the following main antibodies: anti-Aquaporin 2 (1:1000; Novus), anti-phospho-S6 (1:2000; Cell Signaling Technologies) and anti-Beta Actin (1:50,000; SigmaAldrich). Following incubation with secondary antibodies (1:10,000; Jackson ImmunoResearch), membranes PubMed ID:http://www.ncbi.nlm.nih.gov/pubmed/20356390 were washed in TBST and developed utilizing an enhanced chemiluminescence (ECL) detection program (Pierce).Immunohistochemistry (IHC)Mice were perfused transcardially with Bouin fixative or PBS containing 4 paraformaldehyde and testes had been removed, postfixed overnight and cryoprotected with 30 sucrose in PBS. For cryosectioning, testes were frozen for 5 min in dry ice and sectioned using a freezing microtome (Leica). Frozen sections we.